API#

Path Building#

`bids`	Generate bids or bids-like paths
`bids_factory`	Create new `bids()` functions according to a spec

Dataset Creation#

generate_inputs

Dynamically generate snakemake inputs using pybids_inputs.

Dataset Manipulation#

`filter_list`	Filter zip_list, including only entries with provided entity values.
`get_filtered_ziplist_index`	Return the indices of all entries matching the filter query.

Data Structures#

`BidsComponent`	Representation of a bids data component.
`BidsPartialComponent`	Primitive representation of a bids data component.
`BidsComponentRow`	A single row from a BidsComponent.
`BidsDataset`	A bids dataset parsed by pybids, organized into BidsComponents.
`BidsDatasetDict`	Dict equivalent of BidsInputs, for backwards-compatibility.

BIDS App Booststrapping#

Snakebids app with config and arguments.